Raw file	Enzyme	Enzyme mode	Enzyme first search	Enzyme mode first search	Use enzyme first search	Variable modifications	Fixed modifications	Multi modifications	Variable modifications first search	Use variable modifications first search	Requantify	Multiplicity	Max. missed cleavages	Labels0	LC-MS run type	Time-dependent recalibration	MS	MS/MS	MS3	MS/MS Submitted	MS/MS Submitted (SIL)	MS/MS Submitted (ISO)	MS/MS Submitted (PEAK)	MS/MS Identified	MS/MS Identified (SIL)	MS/MS Identified (ISO)	MS/MS Identified (PEAK)	MS/MS Identified [%]	MS/MS Identified (SIL) [%]	MS/MS Identified (ISO) [%]	MS/MS Identified (PEAK) [%]	Peptide Sequences Identified	Peaks	Peaks Sequenced	Peaks Sequenced [%]	Peaks Repeatedly Sequenced	Peaks Repeatedly Sequenced [%]	Isotope Patterns	Isotope Patterns Sequenced	Isotope Patterns Sequenced (z>1)	Isotope Patterns Sequenced [%]	Isotope Patterns Sequenced (z>1) [%]	Isotope Patterns Repeatedly Sequenced	Isotope Patterns Repeatedly Sequenced [%]	Recalibrated	Av. Absolute Mass Deviation [ppm]	Mass Standard Deviation [ppm]	Av. Absolute Mass Deviation [mDa]	Mass Standard Deviation [mDa]
hs0041	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		7821	7354	0	8199	6509	0	1690	5312	4690	0	622	64.79	72.05	0	36.8	4753	297374	6893	2.32	233	3.38	34447	6128	6004	17.79	19.02	232	3.79	+	2.098	2.4586	152830	162560
hs0042	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		6738	8812	0	9856	7768	0	2088	6349	5540	0	809	64.42	71.32	0	38.75	5734	289538	8426	2.91	188	2.23	43222	7503	7364	17.36	18.17	186	2.48	+	2.157	2.5029	152860	162850
hs0043	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		7247	7974	0	8920	7028	0	1892	5729	5013	0	716	64.23	71.33	0	37.84	5182	309335	7551	2.44	231	3.06	39366	6698	6573	17.01	18.15	225	3.36	+	2.1088	2.4591	153540	163700
hs0044	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		6443	9543	0	10589	8497	0	2092	6935	6148	0	787	65.49	72.35	0	37.62	6293	337446	9169	2.72	189	2.06	50808	8222	8073	16.18	16.89	205	2.49	+	2.1006	2.4694	153530	163510
hs0045	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		6289	9846	0	10901	8791	0	2110	7157	6336	0	821	65.65	72.07	0	38.91	6555	388920	9571	2.46	136	1.42	58510	8595	8421	14.69	15.34	161	1.87	+	2.167	2.5106	154450	164740
hs0046	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		6096	10199	0	11303	9095	0	2208	7555	6702	0	853	66.84	73.69	0	38.63	6924	398389	9936	2.49	126	1.27	61389	8915	8754	14.52	15.15	143	1.6	+	2.1051	2.4597	156280	166860
hs0100	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		7939	6889	0	7560	6218	0	1342	4913	4395	0	518	64.99	70.68	0	38.6	4443	389481	6492	1.67	196	3.02	40854	5897	5791	14.43	15.54	211	3.58	+	2.0967	2.4511	157300	167310
hs0101	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		5850	8520	0	9403	7637	0	1766	6127	5460	0	667	65.16	71.49	0	37.77	5576	350057	8127	2.32	218	2.68	45498	7300	7170	16.04	17.17	231	3.16	+	2.2071	2.5393	158820	169410
hs0102	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		6467	8031	0	8871	7191	0	1680	5958	5291	0	667	67.16	73.58	0	39.7	5418	344535	7611	2.21	212	2.79	40993	6844	6725	16.7	17.88	226	3.3	+	2.0911	2.4746	160290	170710
hs0103	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		5704	8635	0	9562	7708	0	1854	6437	5729	0	708	67.32	74.33	0	38.19	5908	357033	8229	2.3	219	2.66	46608	7374	7251	15.82	16.92	237	3.21	+	2.12	2.486	158780	169370
hs0104	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		5388	8906	0	9843	7969	0	1874	6507	5776	0	731	66.11	72.48	0	39.01	5970	382969	8514	2.22	210	2.47	51935	7669	7528	14.77	15.68	215	2.8	+	2.1843	2.5317	159750	170500
hs0105	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)				False	False	1	2		Reporter ion MS2		5245	9035	0	9990	8080	0	1910	6580	5843	0	737	65.87	72.31	0	38.59	5984	391449	8635	2.21	213	2.47	53720	7779	7641	14.48	15.35	225	2.89	+	2.1481	2.5018	160160	171130
Total																	77227	103744	0	114997	92491	0	22506	75559	66923	0	8636	65.71	72.36	0	38.37	32518	4236526					567350	88924	87295	15.67	16.59	2497	2.81		2.1332	2.4883	156570	166960