We performed proteomics on naturally infested green ash (F. pennsylvanica) trees at low and high levels of emerald ash borer (A. planipennis) infestation.
Our integrative analysis of the RNA-Seq and proteomics data identified 14 proteins and 4 transcripts that contribute most to the difference between highly infested and low infested trees.
[doi:10.25345/C5JD4PT62]
[dataset license: CC0 1.0 Universal (CC0 1.0)]
Keywords: emerald ash borer ; Fraxinus ; plant defense ; transcriptomics ; proteomics
Principal Investigators: (in alphabetical order) |
Armand Seguin, Laurentian Forestry Centre, Canada |
Submitting User: | Christine_C |
Chiu CC, Pelletier G, Stival Sena J, Roux-Dalvai F, Prunier J, Droit A, Séguin A.
Integrative analysis of green ash phloem transcripts and proteins during an emerald ash borer infestation.
BMC Plant Biol. 2023 Mar 3;23(1):123. Epub 2023 Mar 3.
Number of Files: | |
Total Size: | |
Spectra: | |
Subscribers: | |
Owner | Reanalyses | |
---|---|---|
Experimental Design | ||
Conditions:
|
||
Biological Replicates:
|
||
Technical Replicates:
|
||
Identification Results | ||
Proteins (Human, Remapped):
|
||
Proteins (Reported):
|
||
Peptides:
|
||
Variant Peptides:
|
||
PSMs:
|
||
Quantification Results | ||
Differential Proteins:
|
||
Quantified Proteins:
|
||
Browse Dataset Files | |
FTP Download Link (click to copy):
|