MassIVE MSV000084524

Complete Public PXD016114

Outer membrane vesicles catabolize lignin-derived aromatic compounds in Pseudomonas putida KT2440

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Description

Lignin modifications and the exoproteome of three aromatic catabolic bacteria: Pseudomonas putida KT2440, Rhodoccocus jostii RHA1, and Amycolatopsis sp. ATCC 39116. Samples were digested with trypsin, then analyzed by LC-MS/MS. Data was searched with MSGF+ and abundances inferred using PNNL's DMS and MTS Processing pipeline [doi:10.25345/C5QT09] [dataset license: CC0 1.0 Universal (CC0 1.0)]

Keywords: outer membrane vesicles ; exoproteomics ; lignin

Contact

Principal Investigators:
(in alphabetical order) 		Gregg T. Beckham, National Renewable Energy Laboratory, USA
Submitting User: alchemistmatt

Publications

Salvachúa D, Werner AZ, Pardo I, Michalska M, Black BA, Donohoe BS, Haugen SJ, Katahira R, Notonier S, Ramirez KJ, Amore A, Purvine SO, Zink EM, Abraham PE, Giannone RJ, Poudel S, Laible PD, Hettich RL, Beckham GT.
Outer membrane vesicles catabolize lignin-derived aromatic compounds in Pseudomonas putida KT2440.
Proc. Natl. Acad. Sci. U.S.A. Epub 2020 Apr 3.

D. Salvachúa, A.Z. Werner, I. Pardo, M. Michalska, B.A. Black, B.S. Donohoe, S. Haugen, R. Katahira, S. Notonier, K.J. Ramirez, S.O. Purvine, E.M. Zink, Paul Abraham, R.J. Giannone, S. Poudel, P. Laible, R.L. Hettich, G.T. Beckham.
Outer membrane vesicles catabolize lignin-derived aromatic compounds in Pseudomonas putidaKT2440.
In press in PNAS.

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