MassIVE MSV000096824

Partial Public

The 40S ribosomal subunit recycling complex modulates mitochondrial dynamics and endoplasmic reticulum - mitochondria tethering at mitochondrial fission/fusion hotspots

Description

Samples 939560 F1-8 are the 8 fractions for the samples A1-D3, as well as F3, G3, H1, and I1 (these 4 were included in both sets and can be used to help normalize between sets). Samples 939560 F1-8 are the 8 fractions for the samples E1-I3, as well as A2 (included in both sets to help with normalization/comparison between sets). 939560: sample TMT Label A1 126 A2 127N A3 127C B1 128N B2 128C B3 129N C1 129C C2 130N C3 130C D1 131N D2 131C D3 132N F3 132C G3 133N H1 133C I1 134N 939561: sample TMT Label E1 126 E2 127N E3 127C F1 128N F2 128C F3 129N G1 129C G2 130N G3 130C H1 131N H2 131C H3 132N I1 132C I2 133N I3 133C A2 134N A1-A3: W minus- MHC> Gal4 (Control) B1-B3: WT- MHC-Gal4> USP10 OE C1-C3: WT- MHC-Gal4> USP10 Sh RNAi D1-D3: WT- MHC-Gal4> USP10 RNAi KK E1-E3: WT- MHC-Gal4> FMR1 OE F1-F3: WT- MHC-Gal4> FMR1 RNAi G1-G3: WT- MHC-Gal4> FMR1 RNAi H1-H3: WT- MHC-Gal4> RIN OE I1-I3: WT- MHC-Gal4> RIN RNAi [doi:10.25345/C5CZ32H5P] [dataset license: CC0 1.0 Universal (CC0 1.0)]

Keywords: Usp10 ; rin ; DatasetType:Proteomics

Contact

Principal Investigators:
(in alphabetical order)
Boxiang Lu, National University of Singapore, Singapore
Zhihao Wu, Southern Methodist University, USA
Submitting User: alemoff
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Experimental Design
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Identification Results
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Quantification Results
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Number of distinct conditions across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct biological replicates across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct technical replicates across all analyses (original submission and reanalyses) associated with this dataset.

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Originally identified proteins that were automatically remapped by MassIVE to proteins in the SwissProt human reference database.

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Number of distinct protein accessions reported across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct unmodified peptide sequences reported across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct peptide sequences (including modified variants or peptidoforms) reported across all analyses (original submission and reanalyses) associated with this dataset.

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Total number of peptide-spectrum matches (i.e. spectrum identifications) reported across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct proteins quantified across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct proteins found to be differentially abundant in at least one comparison across all analyses (original submission and reanalyses) associated with this dataset.

A protein is differentially abundant if its change in abundance across conditions is found to be statistically significant with an adjusted p-value <= 0.05 and lists no issues associated with statistical tests for differential abundance.

Distinct protein accessions are counted across all files submitted in the "Statistical Analysis of Quantified Analytes" category having a "Protein" column in this dataset.

"N/A" means no results of this type were submitted.
This dataset may not contain all raw spectra data as originally deposited in PRIDE. It has been imported to MassIVE for reanalysis purposes, so its spectra data here may consist solely of processed peak lists suitable for reanalysis with most software.