MassIVE MSV000097696

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Pseudomonas fluorescens - response to serotonin (proteomics)

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Description

Pseudomonas fluorescens MFY63 (isolated from human) was incubated with and without 100 micromolar serotonin. The cell pellets were collected after 12 or 24 hours of incubation and the proteome was extracted. [doi:10.25345/C5RR1Q04X] [dataset license: CC0 1.0 Universal (CC0 1.0)]

Keywords: Serotonin ; 5-HT ; Pseudomonas fluorescens ; untargeted proteomics ; DatasetType:Proteomics

Contact

Principal Investigators:
(in alphabetical order) 		Gilles van Wezel, Institute of Biology, Leiden University, The Netherlands
Sahar El Aidy, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, The Netherlands
Submitting User: thomenu

Publications

Barbora Waclawiková, Markus Schwalbe, Diana Ilyaskina, Semih Toptas, Nicola U. Thome, Chao Du, Somayah S. Elsayed, Anne de Jong, Gilles P. van Wezel & Sahar El Aidy.
Serotonin modulation of metabolism and stress response in Pseudomonas fluorescens.
BMC Biol 23, 330 (2025). doi: 10.1186/s12915-025-02434-1.

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Originally identified proteins that were automatically remapped by MassIVE to proteins in the SwissProt human reference database.

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Distinct protein accessions are counted across all files submitted in the "Statistical Analysis of Quantified Analytes" category having a "Protein" column in this dataset.

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Number of distinct proteins found to be differentially abundant in at least one comparison across all analyses (original submission and reanalyses) associated with this dataset.

A protein is differentially abundant if its change in abundance across conditions is found to be statistically significant with an adjusted p-value <= 0.05 and lists no issues associated with statistical tests for differential abundance.

Distinct protein accessions are counted across all files submitted in the "Statistical Analysis of Quantified Analytes" category having a "Protein" column in this dataset.

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This dataset may not contain all raw spectra data as originally deposited in PRIDE. It has been imported to MassIVE for reanalysis purposes, so its spectra data here may consist solely of processed peak lists suitable for reanalysis with most software.