MassIVE MSV000092547

Complete Public PXD044155

SaurabhPandey_WeiLu_NINDS_8LFQ_NL2

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Description

NL2 plays an important role in the inhibitory synapse development. To find the binding partners of the NL2 in the brain. Anti-NL2 antibody was used to pull down the NL2 from brain lysate. Samples were used to do mass spectrometry-based label-free quantitation analysis. NL2 IP samples were compared with control IgG samples. [doi:10.25345/C51G0J510] [dataset license: CC0 1.0 Universal (CC0 1.0)]

Keywords: Mass spectrometry ; label-free quantitation

Contact

Principal Investigators:
(in alphabetical order) 		Wei Lu, National Institute of Neurological Disorders and Stroke, National Institute of Health, USA
Submitting User: psfuserdata
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Experimental Design
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Identification Results
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Number of distinct conditions across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct biological replicates across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct technical replicates across all analyses (original submission and reanalyses) associated with this dataset.

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Originally identified proteins that were automatically remapped by MassIVE to proteins in the SwissProt human reference database.

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Number of distinct protein accessions reported across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct unmodified peptide sequences reported across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct peptide sequences (including modified variants or peptidoforms) reported across all analyses (original submission and reanalyses) associated with this dataset.

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Total number of peptide-spectrum matches (i.e. spectrum identifications) reported across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct proteins quantified across all analyses (original submission and reanalyses) associated with this dataset.

Distinct protein accessions are counted across all files submitted in the "Statistical Analysis of Quantified Analytes" category having a "Protein" column in this dataset.

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Number of distinct proteins found to be differentially abundant in at least one comparison across all analyses (original submission and reanalyses) associated with this dataset.

A protein is differentially abundant if its change in abundance across conditions is found to be statistically significant with an adjusted p-value <= 0.05 and lists no issues associated with statistical tests for differential abundance.

Distinct protein accessions are counted across all files submitted in the "Statistical Analysis of Quantified Analytes" category having a "Protein" column in this dataset.

"N/A" means no results of this type were submitted.
This dataset may not contain all raw spectra data as originally deposited in PRIDE. It has been imported to MassIVE for reanalysis purposes, so its spectra data here may consist solely of processed peak lists suitable for reanalysis with most software.