MassIVE MSV000090439

Partial Public PXD037126

Integrative analysis of green ash phloem transcripts and proteins during an emerald ash borer infestation

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Description

We performed proteomics on naturally infested green ash (F. pennsylvanica) trees at low and high levels of emerald ash borer (A. planipennis) infestation. Our integrative analysis of the RNA-Seq and proteomics data identified 14 proteins and 4 transcripts that contribute most to the difference between highly infested and low infested trees. [doi:10.25345/C5JD4PT62] [dataset license: CC0 1.0 Universal (CC0 1.0)]

Keywords: emerald ash borer ; Fraxinus ; plant defense ; transcriptomics ; proteomics

Contact

Principal Investigators:
(in alphabetical order) 		Armand Seguin, Laurentian Forestry Centre, Canada
Submitting User: Christine_C

Publications

Chiu CC, Pelletier G, Stival Sena J, Roux-Dalvai F, Prunier J, Droit A, Séguin A.
Integrative analysis of green ash phloem transcripts and proteins during an emerald ash borer infestation.
BMC Plant Biol. 2023 Mar 3;23(1):123. Epub 2023 Mar 3.

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Distinct protein accessions are counted across all files submitted in the "Statistical Analysis of Quantified Analytes" category having a "Protein" column in this dataset.

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Number of distinct proteins found to be differentially abundant in at least one comparison across all analyses (original submission and reanalyses) associated with this dataset.

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Distinct protein accessions are counted across all files submitted in the "Statistical Analysis of Quantified Analytes" category having a "Protein" column in this dataset.

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