MassIVE MSV000088643 Files

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Dataset Files
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f.MSV000088643/ccms_parameters/params.xmlccms_parameters25,884
f.MSV000088643/ccms_quant/summary.tsvccms_quant33,633
f.MSV000088643/library/Spectral_Library/2021_1203_LE20_DeepLibMouse_11DIA_BGS.xlslibrary233,859,272
f.MSV000088643/metadata/Proteomics_Metadata.docxmetadata14,630
f.MSV000088643/methods/Creus_et_al_Methods.docxmethods22,370
f.MSV000088643/other/Supplementary_Tables/DIA_Isolation_Scheme.xlsxother11,228
f.MSV000088643/other/Supplementary_Tables/Results_Proteomics_Analysis.xlsxother6,374,581
f.MSV000088643/quant/Spectronaut_Search/.DS_Storequant6,148
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/.DS_Storequant6,148
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/-PTMSiteReport.tsvquant115,904,664
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/20211203_231834_2021_1203_LE20_DeepLib_v8.snequant13,117,887,545
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/AnalyisOverview.txtquant2,031
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/AnalysisLog.txtquant866,130
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_035_LE20_1_WT_1_DIA.raw_01_iRTCalibration.xlsquant159,152
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_037_LE20_6_TYROBP-KO_1_DIA.raw_02_iRTCalibration.xlsquant164,139
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_039_LE20_11_Q175_1_DIA.raw_03_iRTCalibration.xlsquant168,673
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_041_LE20_17_Q175_TYROBP-KO_1_DIA.raw_04_iRTCalibration.xlsquant165,337
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_043_LE20_2_WT_2_DIA.raw_05_iRTCalibration.xlsquant162,104
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_047_LE20_7_TYROBP-KO_2_DIA.raw_06_iRTCalibration.xlsquant162,552
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_049_LE20_12_Q175_2_DIA.raw_07_iRTCalibration.xlsquant161,509
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_051_LE20_18_Q175_TYROBP-KO_2_DIA.raw_08_iRTCalibration.xlsquant166,306
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_053_LE20_3_WT_3_DIA.raw_09_iRTCalibration.xlsquant160,959
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_055_LE20_8_TYROBP-KO_3_DIA.raw_10_iRTCalibration.xlsquant163,857
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_059_LE20_13_Q175_3_DIA.raw_11_iRTCalibration.xlsquant159,647
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_061_LE20_19_Q175_TYROBP-KO_3_DIA.raw_12_iRTCalibration.xlsquant163,555
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_063_LE20_4_WT_4_DIA.raw_13_iRTCalibration.xlsquant164,180
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_065_LE20_9_TYROBP-KO_4_DIA.raw_14_iRTCalibration.xlsquant163,251
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_067_LE20_14_Q175_4_DIA.raw_15_iRTCalibration.xlsquant161,238
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_071_LE20_20_Q175_TYROBP-KO_4_DIA.raw_16_iRTCalibration.xlsquant162,141
f.MSV000088643/quant/Spectronaut_Search/2021_1203_LE20_DeepLib_v8/20211203_190629_2021_1203_LE20_DeepLib_v8/Calibrations/211123_073_LE20_5_WT_5_DIA.raw_17_iRTCalibration.xlsquant161,920
See the MassIVE documentation for more detailed instructions on how to download this dataset's files via FTP:

https://ccms-ucsd.github.io/MassIVEDocumentation/#download_data/