MassIVE MSV000091514 Files

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Dataset Files
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f.MSV000091514/ccms_parameters/params.xmlccms_parameters53,481
f.MSV000091514/ccms_quant/summary.tsvccms_quant40,629
f.MSV000091514/library/221116_SMad2_R-BHB_DDA.kitlibrary40,029,778
f.MSV000091514/library/221116_SMad2_R-BHB_DDA.xlslibrary226,322,821
f.MSV000091514/metadata/Proteomics_Metadata.docxmetadata17,877
f.MSV000091514/methods/Sid_Madhavan_proteostasis_SMad1_methods_0302_2023_v2_Schilling_Lab.docxmethods32,182
f.MSV000091514/other/Supplementary_Tables/Candidates_220425_SMad1_Fraction4_nonorm_directDIA_v6.xlsxother1,422,271
f.MSV000091514/other/Supplementary_Tables/Candidates_220426_SMad1_Fraction1_nonorm_directDIA_v8_updated.xlsxother1,294,299
f.MSV000091514/other/Supplementary_Tables/Candidates_221118_SMad2A_R-BHB_noSMad2A-10_DIA_BHBlibrary_v16.xlsxother3,225,092
f.MSV000091514/other/Supplementary_Tables/Candidates_230105_SMad1_Fraction2_nonorm_directDIA_v12.xlsxother1,708,982
f.MSV000091514/other/Supplementary_Tables/Candidates_230112_SMad1_Fraction3_noSMad1-28_nonorm_directDIA_v15.xlsxother1,256,978
f.MSV000091514/other/Supplementary_Tables/Report_220426_SMad1_Fraction1_nonorm_directDIA_v8_updated.xlsxother704,067
f.MSV000091514/other/Supplementary_Tables/Report_220426_SMad1_Fraction4_nonorm_directDIA_v6.xlsxother865,209
f.MSV000091514/other/Supplementary_Tables/Report_221118_SMad2A_R-BHB_noSMad2A-10_BHBlibrary_v16.xlsxother1,048,585
f.MSV000091514/other/Supplementary_Tables/Report_230105_SMad1_Fraction2_nonorm_directDIA_v12_filtered.xlsxother740,166
f.MSV000091514/other/Supplementary_Tables/Report_230112_SMad1_Fraction3_noSMad1-28_nonorm_directDIA_v15_filtered.xlsxother768,724
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/.DS_Storequant6,148
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/.DS_Storequant6,148
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/20220425_142337_220425_SMad1_Fraction4_directDIA_v6.snequant68,669,965,455
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/AnalyisOverview.txtquant1,426
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/AnalysisLog.txtquant437,150
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/Calibrations/220419_0004_SMad1_9_ctrl_fr4_rep2_400ng_180min_DIA.raw_3_iRTCalibration.xlsquant350,410
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/Calibrations/220419_0005_SMad1_12_ket_fr4_rep2_400ng_180min_DIA.raw_4_iRTCalibration.xlsquant352,161
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/Candidates.tsvquant3,798,911
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/ConditionSetup.tsvquant1,078
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/ExperimentSetupOverview_Joanna_NoNorm_QSp_Local.txtquant452,819
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/GOEnrichment.tsvquant1,427,709
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/Heatmap.pngquant103,493
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/MemoryConsumption.xlsquant58,131
f.MSV000091514/quant/Spectronaut_Search/220425_SMad1_Fraction4_nonorm_directDIA_v6/20220425_100927_220425_SMad1_Fraction4_directDIA_v6/ProteinFDR-Histogram.pdfquant20,814
See the MassIVE documentation for more detailed instructions on how to download this dataset's files via FTP:

https://ccms-ucsd.github.io/MassIVEDocumentation/#download_data/