Confetti: A Multi-protease Map of the HeLa Proteome for Comprehensive ProteomicsMSV000081607 | PXD000900
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000081607 Confetti, ArgC-GluC HCD [launched by 31fc25a7c92347c2b9f58f8f26be259f]RMSV000000362.155 | RPXD032409.155
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, HERC2 [launched by 89f2bcaf3c714e3788b179581bc93515]RMSV000000354.10924 | RPXD031751.10924
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
9,634
5,359
6,721
1,092
0
0
0
0
0
5
67.51
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Dec. 22, 2022, 2:33 PM
3
Plasma Proteome Profiling Reveals the Effects of Weight Loss on the Apolipoprotein Family and Systemic Inflammation StatusMSV000080596 | PXD004242
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080596/PXD004242 [46 out of 51] [launched by 31fc25a7c92347c2b9f58f8f26be259f]RMSV000000382.60 | RPXD032428.60
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
111,937
5,362
11,189
415
0
0
0
0
0
5
246.94
CCMS System (ccms)
Q Exactive
+UNIMOD:1 - "Acetylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:4 - "Iodoacetamide derivative."
UNIMOD:5 - "Carbamylation."
UNIMOD:7 - "Deamidation."
Dec. 30, 2022, 12:10 AM
4
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, TSGA14 [launched by aea60c3352304ba6ab67140f655b6785]RMSV000000355.3916
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
14,175
7,421
9,372
1,376
0
0
0
0
0
7
97.40
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Mar. 5, 2022, 8:33 AM
5
MDA-MB-231 Breast Cancer Bone Tropic vs Parental Hypoxic Secretome AnalysisMSV000080797 | PXD000397
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, EFNB2 [launched by fce971e5ede541cca3fc5307a73294d8]RMSV000000354.2668 | RPXD031751.2668
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
12,137
7,071
8,676
1,444
0
0
0
0
0
5
69.72
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Feb. 20, 2022, 3:04 PM
7
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, DNAJA2 [launched by dab8bba1f45f4e4082f7fa74fbbf30fb]RMSV000000355.7663
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
20,218
10,423
13,427
2,191
0
0
0
0
0
5
86.33
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Dec. 24, 2022, 6:16 AM
8
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, LEMD3 [launched by dab8bba1f45f4e4082f7fa74fbbf30fb]RMSV000000355.5111
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, GHITM [launched by fce971e5ede541cca3fc5307a73294d8]RMSV000000354.2699 | RPXD031751.2699
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, STK11 [launched by fce971e5ede541cca3fc5307a73294d8]RMSV000000354.5026 | RPXD031751.5026
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
12,954
6,324
8,428
997
0
0
0
0
0
5
73.07
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Feb. 23, 2022, 12:27 AM
11
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, NXPH1 [launched by 97f72169640745cdbab0fefeb4490132]RMSV000000355.4466
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, SOD2 [launched by 89f2bcaf3c714e3788b179581bc93515]RMSV000000354.6719 | RPXD031751.6719
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
CCMS ProteoCarta MS-GF+ reanalysis of Myxococcus xanthus DZ2 from DeNovo Peptide Identification Deep Learning Training Set [launched by 8a5f304ae46e47af8c32c3cc6c71a310]RMSV000000256.91 | RPXD015042.91
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, RNF133 [launched by dab8bba1f45f4e4082f7fa74fbbf30fb]RMSV000000355.5719
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
9,030
5,528
6,724
1,233
0
0
0
0
0
5
66.77
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Dec. 23, 2022, 8:17 PM
15
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, TTF2 [launched by dab8bba1f45f4e4082f7fa74fbbf30fb]RMSV000000355.8181
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
10,803
6,353
7,697
1,344
0
0
0
0
0
5
69.78
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Dec. 24, 2022, 9:03 AM
16
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, PSMB8 [launched by dab8bba1f45f4e4082f7fa74fbbf30fb]RMSV000000355.8799
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
9,997
4,487
6,165
872
0
0
0
0
0
5
68.23
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Dec. 24, 2022, 12:26 PM
17
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, GTF2A2 [launched by dab8bba1f45f4e4082f7fa74fbbf30fb]RMSV000000355.5989
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
9,553
5,500
6,727
1,224
0
0
0
0
0
5
67.57
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Dec. 23, 2022, 9:32 PM
18
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, GUCY1A3 [launched by dab8bba1f45f4e4082f7fa74fbbf30fb]RMSV000000355.5647
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, DDRGK1 [launched by fce971e5ede541cca3fc5307a73294d8]RMSV000000354.1024 | RPXD031751.1024
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
9,345
4,471
5,970
841
0
0
0
0
0
5
64.79
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Feb. 19, 2022, 12:20 PM
20
Inhibition of growth factor signaling prevents SARS-CoV-2 replicationMSV000085494 | PXD018357
CoronaMassKB Hackathon: MassIVE/CCMS MSStats on MS-GF+ reanalysis of MSV000085494 / PXD018357 Inhibition of growth factor signaling prevents SARS-CoV-2 replication, Phospho files onlyRMSV000000341.3 | RPXD025723.3
CoronaMassKB Hackathon: Early-access community reanalysis of mass spectrometry data. MassIVE/CCMS MSStats on MS-GF+ reanalysis of MSV000085494 / PXD018357 Inhibition of growth factor signaling prevents SARS-CoV-2 replication, Phospho files only
+TMT
SARS-CoV-2
COVID-19
Infection
Phospho
CoronaMassKB
ProteoCarta
+Homo sapiens (NCBITaxon:9606)
Severe acute respiratory syndrome coronavirus 2 (NCBITaxon:2697049)
42,159
12,217
21,664
3,611
2
1
5
3,505
2,695
12
152.64
CCMS System (ccms)
Orbitrap Fusion Lumos
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:21 - "Phosphorylation."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
UNIMOD:737 - "Sixplex Tandem Mass Tag."
UNIMOD:4 - "Iodoacetamide derivative."
Apr. 29, 2021, 6:53 PM
21
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, HLA-DQA1 [launched by aea60c3352304ba6ab67140f655b6785]RMSV000000355.1106
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ANGEL2 [launched by fce971e5ede541cca3fc5307a73294d8]RMSV000000354.1781 | RPXD031751.1781
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
3,198
1,685
2,222
367
0
0
0
0
0
5
53.37
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Feb. 20, 2022, 12:10 AM
23
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, EMCN [launched by aea60c3352304ba6ab67140f655b6785]RMSV000000355.375
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
10,117
5,218
6,636
946
0
0
0
0
0
7
82.99
CCMS System (ccms)
Q Exactive
+UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:5 - "Carbamylation."
UNIMOD:1 - "Acetylation."
UNIMOD:7 - "Deamidation."
Mar. 4, 2022, 8:50 PM
24
Study of reversible oxidation of thiol proteins after hexyl aminolevulinate mediated photodynamic therapyMSV000080866 | PXD001582
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080866/PXD001582 [12 out of 12] [launched by cfca6e4ba8934e65aa11617b56091339]RMSV000000421.8 | RPXD032466.8
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
+CCMS Living Data reanalysis
MS-GF+ database search reanalysis
MassIVE Knowledge Base (MassIVE-KB)
Homo sapiens (NCBITaxon:9606)
682
373
468
127
0
0
0
0
0
7
49.55
CCMS System (ccms)
Q Exactive
+UNIMOD:1 - "Acetylation."
UNIMOD:28 - "Pyro-glu from Q."
UNIMOD:35 - "Oxidation or Hydroxylation."
UNIMOD:4 - "Iodoacetamide derivative."
UNIMOD:5 - "Carbamylation."
UNIMOD:7 - "Deamidation."
Mar. 21, 2022, 5:41 AM
25
Bioplex 3 AP-MS Dataset for Library ConstructionMSV000088555
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, PNMA6C [launched by dab8bba1f45f4e4082f7fa74fbbf30fb]RMSV000000355.5896
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, GLT1D1 [launched by 89f2bcaf3c714e3788b179581bc93515]RMSV000000354.10325 | RPXD031751.10325
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, RAB8B [launched by fce971e5ede541cca3fc5307a73294d8]RMSV000000354.3883 | RPXD031751.3883
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ACADVL [launched by 89f2bcaf3c714e3788b179581bc93515]RMSV000000354.9341 | RPXD031751.9341
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, CCDC83 [launched by 89f2bcaf3c714e3788b179581bc93515]RMSV000000354.9388 | RPXD031751.9388
Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
MOD:00397 - "A protein modification that is produced by reaction with iodoacetamide, usually replacement of a reactive hydrogen with a methylcarboxamido group."