MassIVE MSV000082623

Partial Public

NEDDylation promotes nuclear protein aggregation and protects the Ubiquitin Proteasome System upon proteotoxic stress

Description

SILAC quantitative mass spectrometry analysis on protein aggregates induced upon heat shock. Two separate performed analysis: A) control siRNA cells (light) with siRNA NEDD8 cells (heavy) and B) control cells (light) with MLN4924 treated cells (heavy). In all conditions cells were heat shocked at 43oC before cell mixing and aggregate isolation. Samples were solubilised in 2xSDS Laemmli buffer, 50ug of protein were run for 15min on 4-12% precast NuPAGE and coomassie blue stained. Lanes were cut in 2 gel pieces before in gel trypsin digestion and mass spectrometry analysis. [dataset license: CC0 1.0 Universal (CC0 1.0)]

Keywords: NEDD8, heat shock, MLN4924, aggregates, SILAC

Contact

Principal Investigators:
(in alphabetical order)
Dimitris Xirodimas, Cell Biology Research Centre of Montpellier, France
Submitting User: surbach

Publications

Maghames CM, Lobato-Gil S, Perrin A, Trauchessec H, Rodriguez MS, Urbach S, Marin P, Xirodimas DP.
NEDDylation promotes nuclear protein aggregation and protects the Ubiquitin Proteasome System upon proteotoxic stress.
Nat Commun. 2018 Oct 22;9(1):4376. doi: 10.1038/s41467-018-06365-0.

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Distinct protein accessions are counted across all files submitted in the "Statistical Analysis of Quantified Analytes" category having a "Protein" column in this dataset.

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