MassIVE MSV000084212

Partial Public

GNPS - Methanolic extracts from Dendrobatids from Colombia

Description

Samples from methanolic extracts from skins of poison frogs. Split injection mode using a desorption temperature of 250C. Separation was performed initiating to 100C for 3 min, and then increasing the temperature to 190C using a rate of 10C/min and maintaining it by 1 min, afterwards incresing to 200C changing the rate to 2C/min and maintaining it by 1 min, and finally increasing to 280C, using a rate of 10C/min, and maintaing to this temperature for 3 min. Analysis were performed in a GC HP 6890 Series equipped with an Agilent Mass Selective Detector 5973 (Agilent technologies, Palo Alto, CA, USA). Separation was performed on a BP-5 capillary GC column (30 m 0.25 mm 0.25 um, SGE, Austin, TX, USA) using helium as a carrier gas at a flow rate of 1.1 mL/mi [doi:10.25345/C5SM0V] [dataset license: CC0 1.0 Universal (CC0 1.0)]

Keywords: Poison frogs ; GC ; Dendrobatidae

Contact

Principal Investigators:
(in alphabetical order)
Mabel Gonzalez, Uniandes, Colombia
Submitting User: mabel_gonzalez
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Experimental Design
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Identification Results
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Quantification Results
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GNPS content goes here (MSV000084212 [task=f5c6ceb0ee0740bea7170cfc54ed9394])
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Distinct condition labels are counted across all files submitted in the "Metadata" category having a "Condition" column in this dataset.

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Number of distinct biological replicates across all analyses (original submission and reanalyses) associated with this dataset.

Distinct replicate labels are counted across all files submitted in the "Metadata" category having a "BioReplicate" or "Replicate" column in this dataset.

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Number of distinct technical replicates across all analyses (original submission and reanalyses) associated with this dataset.

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Originally identified proteins that were automatically remapped by MassIVE to proteins in the SwissProt human reference database.

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Number of distinct protein accessions reported across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct unmodified peptide sequences reported across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct peptide sequences (including modified variants or peptidoforms) reported across all analyses (original submission and reanalyses) associated with this dataset.

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Total number of peptide-spectrum matches (i.e. spectrum identifications) reported across all analyses (original submission and reanalyses) associated with this dataset.

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Number of distinct proteins quantified across all analyses (original submission and reanalyses) associated with this dataset.

Distinct protein accessions are counted across all files submitted in the "Statistical Analysis of Quantified Analytes" category having a "Protein" column in this dataset.

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Number of distinct proteins found to be differentially abundant in at least one comparison across all analyses (original submission and reanalyses) associated with this dataset.

A protein is differentially abundant if its change in abundance across conditions is found to be statistically significant with an adjusted p-value <= 0.05 and lists no issues associated with statistical tests for differential abundance.

Distinct protein accessions are counted across all files submitted in the "Statistical Analysis of Quantified Analytes" category having a "Protein" column in this dataset.

"N/A" means no results of this type were submitted.
This dataset may not contain all raw spectra data as originally deposited in PRIDE. It has been imported to MassIVE for reanalysis purposes, so its spectra data here may consist solely of processed peak lists suitable for reanalysis with most software.